PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN34068.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 266aa    MW: 29389.1 Da    PI: 5.9385
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN34068.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.2e-08139179954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  KHN34068.1 139 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 179
                 699*****************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.951130179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-14135193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.5E-12136187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.95E-11136184No hitNo description
SMARTSM003531.3E-12136185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-6140179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010197Biological Processpolar nucleus fusion
GO:0005634Cellular Componentnucleus
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
METNTSAFTN VNSTWNLEKM ETNEQQNDEH NIILQVQDPM GSGIWPSNNY HNLLQMHQTP  60
NTTTLSIIAP PPSSSGFLGD ILGVHNLEED EEPEEELGAM KEMMYKIAAM QPVDIAPATI  120
RKPKRRNVRI SDDPQSVAAR HRRERISEKI RILQRLVPGG TKMDTASMLD EAIRYVKFLK  180
RQIRLLQSIP QSSNPPQCIG VATTSHHAST LLLAPSCDWP FAPNVLPSST AATASMDMSA  240
GLGFDVGHAH ACDGSSSFNH HEVISE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003524301.10.0PREDICTED: transcription factor HEC3-like
TrEMBLA0A0B2RPA40.0A0A0B2RPA4_GLYSO; Transcription factor HEC3
STRINGGLYMA05G32410.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65134141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.15e-47bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]